Protein–RNA interactions for Protein: Q9UK80

USP21, Ubiquitin carboxyl-terminal hydrolase 21, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP21Q9UK80 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC23.69■■□□□ 1.38
USP21Q9UK80 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
USP21Q9UK80 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP21Q9UK80 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.69■■□□□ 1.38
USP21Q9UK80 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP21Q9UK80 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.69■■□□□ 1.38
USP21Q9UK80 LINC02560-201ENST00000596379 459 ntBASIC23.69■■□□□ 1.38
USP21Q9UK80 AC068137.2-201ENST00000605408 478 ntBASIC23.69■■□□□ 1.38
USP21Q9UK80 AL353135.1-201ENST00000606729 504 ntBASIC23.69■■□□□ 1.38
USP21Q9UK80 AC008761.3-201ENST00000624803 892 ntBASIC23.69■■□□□ 1.38
USP21Q9UK80 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP21Q9UK80 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.69■■□□□ 1.38
USP21Q9UK80 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP21Q9UK80 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC23.69■■□□□ 1.38
USP21Q9UK80 AC012676.1-201ENST00000574705 1949 ntBASIC23.69■■□□□ 1.38
USP21Q9UK80 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP21Q9UK80 LINC00565-201ENST00000562710 2331 ntBASIC23.68■■□□□ 1.38
USP21Q9UK80 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP21Q9UK80 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.68■■□□□ 1.38
USP21Q9UK80 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USP21Q9UK80 AL627223.1-201ENST00000416693 442 ntBASIC23.68■■□□□ 1.38
USP21Q9UK80 DDX43P3-201ENST00000441064 443 ntBASIC23.68■■□□□ 1.38
USP21Q9UK80 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC23.68■■□□□ 1.38
USP21Q9UK80 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC23.68■■□□□ 1.38
USP21Q9UK80 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.68■■□□□ 1.38
USP21Q9UK80 COX11-202ENST00000571584 1108 ntTSL 2 BASIC23.68■■□□□ 1.38
USP21Q9UK80 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.68■■□□□ 1.38
USP21Q9UK80 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP21Q9UK80 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
USP21Q9UK80 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.68■■□□□ 1.38
USP21Q9UK80 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
USP21Q9UK80 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USP21Q9UK80 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
USP21Q9UK80 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP21Q9UK80 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
USP21Q9UK80 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
USP21Q9UK80 AC148477.5-201ENST00000625164 1645 ntBASIC23.67■■□□□ 1.38
USP21Q9UK80 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP21Q9UK80 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
USP21Q9UK80 MYLKP1-201ENST00000509077 1580 ntBASIC23.67■■□□□ 1.38
USP21Q9UK80 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.67■■□□□ 1.38
USP21Q9UK80 AC003669.1-201ENST00000334569 611 ntBASIC23.67■■□□□ 1.38
USP21Q9UK80 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
USP21Q9UK80 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP21Q9UK80 AC096633.1-201ENST00000422446 749 ntBASIC23.67■■□□□ 1.38
USP21Q9UK80 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC23.67■■□□□ 1.38
USP21Q9UK80 FAM207CP-201ENST00000443486 507 ntBASIC23.67■■□□□ 1.38
USP21Q9UK80 AC051619.7-201ENST00000568314 623 ntBASIC23.67■■□□□ 1.38
USP21Q9UK80 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.67■■□□□ 1.38
USP21Q9UK80 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.67■■□□□ 1.38
USP21Q9UK80 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP21Q9UK80 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP21Q9UK80 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
USP21Q9UK80 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP21Q9UK80 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP21Q9UK80 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC23.66■■□□□ 1.38
USP21Q9UK80 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP21Q9UK80 MIR943-201ENST00000401286 94 ntBASIC23.66■■□□□ 1.38
USP21Q9UK80 CENPM-205ENST00000404067 905 ntTSL 3 BASIC23.66■■□□□ 1.38
USP21Q9UK80 AC103564.2-201ENST00000432853 1299 ntBASIC23.66■■□□□ 1.38
USP21Q9UK80 CNN2P2-201ENST00000443536 909 ntBASIC23.66■■□□□ 1.38
USP21Q9UK80 CNN2P3-201ENST00000450201 906 ntBASIC23.66■■□□□ 1.38
USP21Q9UK80 AL136317.3-201ENST00000618497 906 ntBASIC23.66■■□□□ 1.38
USP21Q9UK80 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.66■■□□□ 1.38
USP21Q9UK80 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP21Q9UK80 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP21Q9UK80 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
USP21Q9UK80 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP21Q9UK80 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
USP21Q9UK80 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC23.65■■□□□ 1.38
USP21Q9UK80 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
USP21Q9UK80 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.65■■□□□ 1.38
USP21Q9UK80 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC23.65■■□□□ 1.38
USP21Q9UK80 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.65■■□□□ 1.38
USP21Q9UK80 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC23.65■■□□□ 1.38
USP21Q9UK80 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC23.65■■□□□ 1.38
USP21Q9UK80 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.65■■□□□ 1.38
USP21Q9UK80 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC23.65■■□□□ 1.38
USP21Q9UK80 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.65■■□□□ 1.38
USP21Q9UK80 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
USP21Q9UK80 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP21Q9UK80 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP21Q9UK80 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP21Q9UK80 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.64■■□□□ 1.37
USP21Q9UK80 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC23.64■■□□□ 1.37
USP21Q9UK80 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP21Q9UK80 CR383656.12-201ENST00000549567 513 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms