Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 KRT18P65-201ENST00000439811 1286 ntBASIC16.55■□□□□ 0.24
LRFN1Q9P244 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 BNIP3P18-201ENST00000593976 575 ntBASIC16.55■□□□□ 0.24
LRFN1Q9P244 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 AL031008.1-201ENST00000619963 541 ntBASIC16.55■□□□□ 0.24
LRFN1Q9P244 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRFN1Q9P244 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRFN1Q9P244 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 AL591684.3-201ENST00000605187 298 ntBASIC16.54■□□□□ 0.24
LRFN1Q9P244 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRFN1Q9P244 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.54■□□□□ 0.24
LRFN1Q9P244 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 ESPNP-201ENST00000270691 2015 ntBASIC16.53■□□□□ 0.24
LRFN1Q9P244 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 AC079781.3-201ENST00000449110 356 ntBASIC16.53■□□□□ 0.24
LRFN1Q9P244 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 AL160237.2-201ENST00000556165 472 ntBASIC16.53■□□□□ 0.24
LRFN1Q9P244 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.53■□□□□ 0.24
LRFN1Q9P244 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 AP000974.1-201ENST00000623909 2387 ntBASIC16.53■□□□□ 0.24
LRFN1Q9P244 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.53■□□□□ 0.24
LRFN1Q9P244 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRFN1Q9P244 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRFN1Q9P244 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRFN1Q9P244 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms