Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 KRT18P65-201ENST00000439811 1286 ntBASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 AC091304.2-201ENST00000564639 760 ntBASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 BNIP3P18-201ENST00000593976 575 ntBASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 AL121772.3-201ENST00000610840 674 ntBASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMG20BQ9P0W2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 AC111152.3-201ENST00000569699 673 ntBASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 AL691432.3-201ENST00000621860 400 ntBASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMG20BQ9P0W2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 TPM4P1-201ENST00000436100 807 ntBASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
HMG20BQ9P0W2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 MINOS1P3-201ENST00000457048 203 ntBASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.92■■□□□ 1.1
HMG20BQ9P0W2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMG20BQ9P0W2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms