Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 AC011676.5-201ENST00000624864 2660 ntBASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.84■□□□□ 0.45
MKS1Q9NXB0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.83■□□□□ 0.45
MKS1Q9NXB0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
MKS1Q9NXB0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MKS1Q9NXB0 AC092338.2-201ENST00000568827 1415 ntBASIC17.81■□□□□ 0.44
MKS1Q9NXB0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 FAM197Y4-202ENST00000622692 608 ntBASIC17.81■□□□□ 0.44
MKS1Q9NXB0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.81■□□□□ 0.44
MKS1Q9NXB0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MKS1Q9NXB0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MKS1Q9NXB0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MKS1Q9NXB0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
MKS1Q9NXB0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms