Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MFAP1P1-201ENST00000442257 1255 ntBASIC20.17■□□□□ 0.82
CBX8Q9HC52 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 DUTP2-201ENST00000519164 463 ntBASIC20.17■□□□□ 0.82
CBX8Q9HC52 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CBX8Q9HC52 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 AC073648.6-201ENST00000641589 218 ntBASIC20.17■□□□□ 0.82
CBX8Q9HC52 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX8Q9HC52 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX8Q9HC52 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX8Q9HC52 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CBX8Q9HC52 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CBX8Q9HC52 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 AC132938.6-201ENST00000623828 1655 ntBASIC20.16■□□□□ 0.82
CBX8Q9HC52 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CBX8Q9HC52 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.16■□□□□ 0.82
CBX8Q9HC52 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CBX8Q9HC52 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.16■□□□□ 0.82
CBX8Q9HC52 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.16■□□□□ 0.82
CBX8Q9HC52 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.16■□□□□ 0.82
CBX8Q9HC52 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.16■□□□□ 0.82
CBX8Q9HC52 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CBX8Q9HC52 LINC00304-203ENST00000565008 1864 ntBASIC20.16■□□□□ 0.82
CBX8Q9HC52 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 KRT18P23-201ENST00000435622 1283 ntBASIC20.15■□□□□ 0.82
CBX8Q9HC52 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CBX8Q9HC52 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.15■□□□□ 0.82
CBX8Q9HC52 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CBX8Q9HC52 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CBX8Q9HC52 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CBX8Q9HC52 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.82
CBX8Q9HC52 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CBX8Q9HC52 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CBX8Q9HC52 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CBX8Q9HC52 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms