Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AC104581.1-202ENST00000635932 2618 ntBASIC15.8■□□□□ 0.12
CDH20Q9HBT6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AL031133.1-201ENST00000406807 723 ntBASIC15.8■□□□□ 0.12
CDH20Q9HBT6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AP003733.1-201ENST00000491725 852 ntBASIC15.8■□□□□ 0.12
CDH20Q9HBT6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AL445228.2-201ENST00000605589 952 ntBASIC15.8■□□□□ 0.12
CDH20Q9HBT6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH20Q9HBT6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 AL162741.1-201ENST00000565563 1558 ntBASIC15.79■□□□□ 0.12
CDH20Q9HBT6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 AC007613.1-201ENST00000572811 2597 ntBASIC15.79■□□□□ 0.12
CDH20Q9HBT6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.79■□□□□ 0.12
CDH20Q9HBT6 AL645929.1-201ENST00000420084 975 ntBASIC15.79■□□□□ 0.12
CDH20Q9HBT6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 AC009113.1-201ENST00000570267 2443 ntBASIC15.79■□□□□ 0.12
CDH20Q9HBT6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH20Q9HBT6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 KRT89P-201ENST00000620027 1478 ntBASIC15.78■□□□□ 0.12
CDH20Q9HBT6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 MIR662-201ENST00000384847 95 ntBASIC15.78■□□□□ 0.12
CDH20Q9HBT6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms