Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC40Q9H9A6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 BX664615.1-201ENST00000443558 458 ntBASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 AL441883.1-201ENST00000566170 1045 ntBASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC40Q9H9A6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 OR6D1P-202ENST00000641007 5290 ntBASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 AC113404.2-201ENST00000507884 177 ntBASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 LINC00896-202ENST00000609602 2128 ntBASIC18.34■□□□□ 0.53
LRRC40Q9H9A6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRC40Q9H9A6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 KRT89P-201ENST00000620027 1478 ntBASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC40Q9H9A6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC40Q9H9A6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms