Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 HBZP1-201ENST00000354915 429 ntBASIC16.12■□□□□ 0.17
NELFAQ9H3P2 AL031133.1-201ENST00000406807 723 ntBASIC16.12■□□□□ 0.17
NELFAQ9H3P2 SPDYE13P-201ENST00000445314 798 ntBASIC16.12■□□□□ 0.17
NELFAQ9H3P2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 NOC2LP1-202ENST00000452600 2235 ntBASIC16.12■□□□□ 0.17
NELFAQ9H3P2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 AC005332.8-201ENST00000622750 2735 ntBASIC16.12■□□□□ 0.17
NELFAQ9H3P2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.12■□□□□ 0.17
NELFAQ9H3P2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 PVRIG2P-201ENST00000435460 978 ntBASIC16.11■□□□□ 0.17
NELFAQ9H3P2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 AL671277.2-201ENST00000458060 996 ntBASIC16.11■□□□□ 0.17
NELFAQ9H3P2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NELFAQ9H3P2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 PHGDH-209ENST00000641074 1780 ntBASIC16.1■□□□□ 0.17
NELFAQ9H3P2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 HLA-F-220ENST00000434407 884 ntBASIC16.1■□□□□ 0.17
NELFAQ9H3P2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 AL136038.4-201ENST00000603606 1261 ntBASIC16.1■□□□□ 0.17
NELFAQ9H3P2 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.1■□□□□ 0.17
NELFAQ9H3P2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 AL391807.1-203ENST00000604392 2365 ntBASIC16.1■□□□□ 0.17
NELFAQ9H3P2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NELFAQ9H3P2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms