Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 UBE2SP1-201ENST00000450587 669 ntBASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHACTR1Q9C0D0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 HLA-J-201ENST00000462773 1622 ntBASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 AL355355.2-201ENST00000442321 338 ntBASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 AC026471.5-201ENST00000615068 467 ntBASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 TMEM191A-211ENST00000637163 1067 ntBASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 TNRC18P3-201ENST00000441896 2691 ntBASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PHACTR1Q9C0D0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 AP001094.4-201ENST00000579008 2176 ntBASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 AC010653.2-201ENST00000623505 997 ntBASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 AC100803.2-201ENST00000562459 1963 ntBASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.3■□□□□ 0.52
PHACTR1Q9C0D0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PHACTR1Q9C0D0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.29■□□□□ 0.52
PHACTR1Q9C0D0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PHACTR1Q9C0D0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms