Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 SNORA78-201ENST00000459373 127 ntBASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 SIRPAP1-201ENST00000448467 1770 ntBASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
THUMPD3Q9BV44 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 SDHAP2-201ENST00000455183 2001 ntBASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 AL163051.1-201ENST00000569214 1512 ntBASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 AC097488.1-201ENST00000507834 756 ntBASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 MIR4785-201ENST00000585005 73 ntBASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 DGCR10-201ENST00000609839 495 ntBASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 AC009102.3-201ENST00000623118 1491 ntBASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
THUMPD3Q9BV44 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
THUMPD3Q9BV44 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THUMPD3Q9BV44 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms