Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 AC093827.2-201ENST00000512654 315 ntBASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 AL353719.1-201ENST00000566847 864 ntBASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 MIR3180-5-201ENST00000583743 153 ntBASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 MYLKP1-201ENST00000509077 1580 ntBASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHRDL1Q9BU40 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 CCR12P-201ENST00000446203 998 ntBASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 KRT18P41-201ENST00000518924 1277 ntBASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 C2orf69P3-201ENST00000565542 1120 ntBASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 AC092338.2-201ENST00000568827 1415 ntBASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 AC034236.2-201ENST00000606662 1610 ntBASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHRDL1Q9BU40 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 KRT8P9-201ENST00000558927 1449 ntBASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 AL596275.1-201ENST00000423464 877 ntBASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 AC116562.4-202ENST00000641738 218 ntBASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CHRDL1Q9BU40 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 AC011270.2-201ENST00000624293 2550 ntBASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 AC099343.3-201ENST00000605834 2503 ntBASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms