Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 AC011676.5-201ENST00000624864 2660 ntBASIC14.67□□□□□ -0.06
RAB40CQ96S21 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40CQ96S21 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAB40CQ96S21 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 TNRC18P3-201ENST00000441896 2691 ntBASIC14.66□□□□□ -0.06
RAB40CQ96S21 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 MIR149-201ENST00000384879 89 ntBASIC14.66□□□□□ -0.06
RAB40CQ96S21 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RAB40CQ96S21 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40CQ96S21 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 AC133963.1-201ENST00000504166 1679 ntBASIC14.65□□□□□ -0.06
RAB40CQ96S21 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 SDHAP2-201ENST00000455183 2001 ntBASIC14.65□□□□□ -0.06
RAB40CQ96S21 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 AP003097.1-201ENST00000530657 1135 ntBASIC14.65□□□□□ -0.06
RAB40CQ96S21 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 AL355312.1-201ENST00000407115 2176 ntBASIC14.65□□□□□ -0.06
RAB40CQ96S21 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40CQ96S21 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40CQ96S21 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RAB40CQ96S21 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40CQ96S21 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40CQ96S21 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB40CQ96S21 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB40CQ96S21 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms