Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 PMPCAP1-201ENST00000508114 1576 ntBASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NECTIN4Q96NY8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 AC007967.3-201ENST00000434308 558 ntBASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NECTIN4Q96NY8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 AC073621.1-201ENST00000392730 636 ntBASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 CYMP-203ENST00000474680 1263 ntBASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 RFPL4AP1-201ENST00000530883 850 ntBASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 LINC01126-201ENST00000623515 1646 ntBASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 AL032819.2-201ENST00000624543 2162 ntBASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NECTIN4Q96NY8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 SIGLEC16-201ENST00000599858 1437 ntBASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 AC122714.2-201ENST00000502787 707 ntBASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NECTIN4Q96NY8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NECTIN4Q96NY8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms