Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.27■□□□□ 0.04
SPG11Q96JI7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SPG11Q96JI7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SPG11Q96JI7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SPG11Q96JI7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SPG11Q96JI7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 AC093484.2-201ENST00000580996 2166 ntBASIC15.27■□□□□ 0.03
SPG11Q96JI7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.27■□□□□ 0.03
SPG11Q96JI7 VN2R19P-201ENST00000442399 1052 ntBASIC15.27■□□□□ 0.03
SPG11Q96JI7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.27■□□□□ 0.03
SPG11Q96JI7 AC006557.2-201ENST00000592985 1240 ntBASIC15.27■□□□□ 0.03
SPG11Q96JI7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.27■□□□□ 0.03
SPG11Q96JI7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SPG11Q96JI7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPG11Q96JI7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AC027612.4-201ENST00000605371 583 ntBASIC15.26■□□□□ 0.03
SPG11Q96JI7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AL499627.1-201ENST00000569373 2188 ntBASIC15.26■□□□□ 0.03
SPG11Q96JI7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 COX20P2-201ENST00000452636 358 ntBASIC15.26■□□□□ 0.03
SPG11Q96JI7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AC093512.1-201ENST00000617969 520 ntBASIC15.26■□□□□ 0.03
SPG11Q96JI7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.26■□□□□ 0.03
SPG11Q96JI7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPG11Q96JI7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 PMPCAP1-201ENST00000508114 1576 ntBASIC15.25■□□□□ 0.03
SPG11Q96JI7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 AC141586.3-201ENST00000562166 1838 ntBASIC15.25■□□□□ 0.03
SPG11Q96JI7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
SPG11Q96JI7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPG11Q96JI7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPG11Q96JI7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SPG11Q96JI7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms