Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 AC009102.3-201ENST00000623118 1491 ntBASIC18.63■□□□□ 0.57
IFT43Q96FT9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 AC099343.3-201ENST00000605834 2503 ntBASIC18.62■□□□□ 0.57
IFT43Q96FT9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 TNRC18P3-201ENST00000441896 2691 ntBASIC18.62■□□□□ 0.57
IFT43Q96FT9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 AC112907.2-201ENST00000448639 330 ntBASIC18.62■□□□□ 0.57
IFT43Q96FT9 SEC1P-202ENST00000473944 940 ntBASIC18.62■□□□□ 0.57
IFT43Q96FT9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 MIR3180-4-201ENST00000582223 153 ntBASIC18.62■□□□□ 0.57
IFT43Q96FT9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 BICD1-207ENST00000551848 1962 ntBASIC18.62■□□□□ 0.57
IFT43Q96FT9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
IFT43Q96FT9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
IFT43Q96FT9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 AC009053.2-201ENST00000563701 2365 ntBASIC18.61■□□□□ 0.57
IFT43Q96FT9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 ZNF444P1-201ENST00000559497 298 ntBASIC18.61■□□□□ 0.57
IFT43Q96FT9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IFT43Q96FT9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.61■□□□□ 0.57
IFT43Q96FT9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 AC034232.1-201ENST00000506026 1064 ntBASIC18.6■□□□□ 0.57
IFT43Q96FT9 VENTXP5-201ENST00000523979 775 ntBASIC18.6■□□□□ 0.57
IFT43Q96FT9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 HYMAI.1-201ENST00000620949 238 ntBASIC18.6■□□□□ 0.57
IFT43Q96FT9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.6■□□□□ 0.57
IFT43Q96FT9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IFT43Q96FT9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.6■□□□□ 0.57
IFT43Q96FT9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IFT43Q96FT9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms