Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 RPS2P55-201ENST00000397318 883 ntBASIC15.72■□□□□ 0.11
CPNE2Q96FN4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 CCR12P-201ENST00000446203 998 ntBASIC15.72■□□□□ 0.11
CPNE2Q96FN4 TSPY17P-201ENST00000450329 467 ntBASIC15.72■□□□□ 0.11
CPNE2Q96FN4 AC107956.1-201ENST00000494359 873 ntBASIC15.72■□□□□ 0.11
CPNE2Q96FN4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 MIR3180-4-201ENST00000582223 153 ntBASIC15.72■□□□□ 0.11
CPNE2Q96FN4 AL096828.2-201ENST00000567259 1965 ntBASIC15.72■□□□□ 0.11
CPNE2Q96FN4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CPNE2Q96FN4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.71■□□□□ 0.11
CPNE2Q96FN4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 AC142381.4-202ENST00000563973 229 ntBASIC15.71■□□□□ 0.11
CPNE2Q96FN4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 AC233702.5-201ENST00000584107 538 ntBASIC15.71■□□□□ 0.11
CPNE2Q96FN4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 AC008687.5-201ENST00000593746 558 ntBASIC15.71■□□□□ 0.11
CPNE2Q96FN4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE2Q96FN4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE2Q96FN4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE2Q96FN4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CPNE2Q96FN4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
CPNE2Q96FN4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
CPNE2Q96FN4 AC036111.1-201ENST00000533973 1582 ntBASIC15.7■□□□□ 0.1
CPNE2Q96FN4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 KRT18P23-201ENST00000435622 1283 ntBASIC15.7■□□□□ 0.1
CPNE2Q96FN4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE2Q96FN4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms