Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PGBD4Q96DM1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PGBD4Q96DM1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.53■□□□□ 0.72
PGBD4Q96DM1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.52■□□□□ 0.72
PGBD4Q96DM1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 FAM197Y8-203ENST00000450145 560 ntBASIC19.52■□□□□ 0.72
PGBD4Q96DM1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 AC011467.2-201ENST00000598425 242 ntBASIC19.52■□□□□ 0.72
PGBD4Q96DM1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PGBD4Q96DM1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PGBD4Q96DM1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PGBD4Q96DM1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 INTS4P1-201ENST00000438455 1935 ntBASIC19.51■□□□□ 0.71
PGBD4Q96DM1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PGBD4Q96DM1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 RBM17P3-201ENST00000417687 1192 ntBASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AF186996.4-201ENST00000467186 377 ntBASIC19.5■□□□□ 0.71
PGBD4Q96DM1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 TP73-AS1-207ENST00000624167 988 ntBASIC19.5■□□□□ 0.71
PGBD4Q96DM1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PGBD4Q96DM1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms