Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNRNP40Q96DI7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.2■□□□□ 0.18
SNRNP40Q96DI7 AL049812.1-201ENST00000432563 2267 ntBASIC16.2■□□□□ 0.18
SNRNP40Q96DI7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SNRNP40Q96DI7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 LAGE3P1-201ENST00000425356 484 ntBASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNRNP40Q96DI7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 AC023274.1-201ENST00000418278 595 ntBASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 AC009947.1-201ENST00000444350 727 ntBASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 LINC02084-201ENST00000606069 1096 ntBASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRNP40Q96DI7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 BX005266.1-201ENST00000473402 457 ntBASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRNP40Q96DI7 MTDHP5-201ENST00000598980 586 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms