Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.56■□□□□ 0.24
HPS1Q92902 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HPS1Q92902 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS1Q92902 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HPS1Q92902 FLJ38576-201ENST00000623820 2459 ntBASIC16.55■□□□□ 0.24
HPS1Q92902 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 MIR1224-201ENST00000408193 85 ntBASIC16.55■□□□□ 0.24
HPS1Q92902 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 TUBB8P6-201ENST00000436895 1288 ntBASIC16.55■□□□□ 0.24
HPS1Q92902 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HPS1Q92902 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS1Q92902 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
HPS1Q92902 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.55■□□□□ 0.24
HPS1Q92902 Z99916.3-201ENST00000623422 1080 ntBASIC16.55■□□□□ 0.24
HPS1Q92902 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 TEX21P-204ENST00000641479 1693 ntBASIC16.55■□□□□ 0.24
HPS1Q92902 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS1Q92902 LINC00554-201ENST00000564841 3011 ntBASIC16.55■□□□□ 0.24
HPS1Q92902 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HPS1Q92902 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPS1Q92902 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.55■□□□□ 0.24
HPS1Q92902 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.54■□□□□ 0.24
HPS1Q92902 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.54■□□□□ 0.24
HPS1Q92902 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS1Q92902 AP002982.1-201ENST00000492365 877 ntBASIC16.54■□□□□ 0.24
HPS1Q92902 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.54■□□□□ 0.24
HPS1Q92902 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS1Q92902 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS1Q92902 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HPS1Q92902 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HPS1Q92902 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS1Q92902 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS1Q92902 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
HPS1Q92902 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.54■□□□□ 0.24
HPS1Q92902 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPS1Q92902 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HPS1Q92902 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.53■□□□□ 0.24
HPS1Q92902 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HPS1Q92902 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HPS1Q92902 AL162741.1-201ENST00000565563 1558 ntBASIC16.53■□□□□ 0.24
HPS1Q92902 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HPS1Q92902 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms