Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AC022144.1-201ENST00000602255 1580 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 SMG8-203ENST00000578922 2178 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC103564.2-201ENST00000432853 1299 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AP003419.4-201ENST00000616071 517 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 MPV17-204ENST00000399052 749 ntTSL 4 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RNA5-8SN1-201ENST00000610460 153 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RNA5-8SN5-202ENST00000612463 153 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RNA5-8SN4-201ENST00000613359 153 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RNA5-8SN5-201ENST00000619471 153 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC020931.1-201ENST00000589622 1346 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AL020989.1-201ENST00000422979 469 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 UXT-AS1-201ENST00000590504 1525 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AL353593.2-201ENST00000602529 1483 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 LINC01225-203ENST00000563550 1244 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 MIR6080-201ENST00000617359 66 ntBASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC7.23□□□□□ -1.25
SYNE2Q8WXH0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC7.22□□□□□ -1.25
SYNE2Q8WXH0 AC148477.5-201ENST00000625164 1645 ntBASIC7.22□□□□□ -1.25
SYNE2Q8WXH0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms