Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM41Q8WV44 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 CD63-204ENST00000546939 779 ntTSL 3 BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 IGHV3-41-201ENST00000613121 348 ntBASIC30.83■■■□□ 2.53
TRIM41Q8WV44 AC087289.5-201ENST00000586076 3175 ntBASIC30.83■■■□□ 2.53
TRIM41Q8WV44 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 TNXA-203ENST00000507684 2038 ntBASIC30.83■■■□□ 2.53
TRIM41Q8WV44 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM41Q8WV44 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
TRIM41Q8WV44 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 AP002472.1-201ENST00000577490 586 ntBASIC30.82■■■□□ 2.52
TRIM41Q8WV44 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM41Q8WV44 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 SNCG-201ENST00000348795 684 ntTSL 2 BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
TRIM41Q8WV44 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 CFL1-202ENST00000524553 860 ntTSL 2 BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM41Q8WV44 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 RN7SL606P-201ENST00000472779 293 ntBASIC30.79■■■□□ 2.52
TRIM41Q8WV44 AC090616.6-201ENST00000582640 721 ntBASIC30.79■■■□□ 2.52
TRIM41Q8WV44 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM41Q8WV44 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 AC113404.2-201ENST00000507884 177 ntBASIC30.78■■■□□ 2.52
TRIM41Q8WV44 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 AC012645.4-201ENST00000610691 1061 ntBASIC30.78■■■□□ 2.52
TRIM41Q8WV44 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
TRIM41Q8WV44 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
TRIM41Q8WV44 AC120498.9-201ENST00000339021 3867 ntBASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms