Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
CNIH3Q8TBE1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 SLC29A4P1-201ENST00000398760 971 ntBASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNIH3Q8TBE1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 AC133963.1-201ENST00000504166 1679 ntBASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.52■□□□□ 0.23
CNIH3Q8TBE1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 MIR564-202ENST00000385049 94 ntBASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 AC083880.1-201ENST00000608266 535 ntBASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNIH3Q8TBE1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms