Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 AL031133.1-201ENST00000406807 723 ntBASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 MIR1224-201ENST00000408193 85 ntBASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCLL1Q8TB92 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 MIR662-201ENST00000384847 95 ntBASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 AL121956.5-201ENST00000625261 221 ntBASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 AL024508.2-201ENST00000607749 1894 ntBASIC17.71■□□□□ 0.43
HMGCLL1Q8TB92 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HMGCLL1Q8TB92 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 AC099343.3-201ENST00000605834 2503 ntBASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 PRORSD1P-202ENST00000563365 2154 ntBASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 SPDYE13P-201ENST00000445314 798 ntBASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 ZNF444P1-201ENST00000559497 298 ntBASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 AL136038.3-201ENST00000561909 1096 ntBASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 GMCL1P1-201ENST00000463439 1581 ntBASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 AC006116.8-202ENST00000587620 1550 ntBASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGCLL1Q8TB92 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGCLL1Q8TB92 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms