Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 SAPCD2P3-201ENST00000455031 850 ntBASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.99■□□□□ 0.95
NEDD1Q8NHV4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 AC007967.3-201ENST00000434308 558 ntBASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 AL160237.2-201ENST00000556165 472 ntBASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 AL121912.1-201ENST00000603683 238 ntBASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 REXO1L9P-201ENST00000604264 2108 ntBASIC20.98■□□□□ 0.95
NEDD1Q8NHV4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 FDX1P1-201ENST00000449115 551 ntBASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NEDD1Q8NHV4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 AC010460.3-201ENST00000511359 1579 ntBASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NEDD1Q8NHV4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms