Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CFAP61Q8NHU2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 AC036111.1-201ENST00000533973 1582 ntBASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 AL357033.4-201ENST00000617703 1807 ntBASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 AC145285.6-201ENST00000604632 637 ntBASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.31■□□□□ 0.52
CFAP61Q8NHU2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 FAM87A-204ENST00000613235 858 ntBASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 AC010653.2-201ENST00000623505 997 ntBASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 AC134043.2-201ENST00000624206 2238 ntBASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CFAP61Q8NHU2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 AL109659.2-201ENST00000606809 1674 ntBASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 ECEL1P3-201ENST00000427961 737 ntBASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.29■□□□□ 0.52
CFAP61Q8NHU2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms