Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK4Q8NE63 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIPK4Q8NE63 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.58■□□□□ 0.4
HIPK4Q8NE63 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 AP001094.4-201ENST00000579008 2176 ntBASIC17.57■□□□□ 0.4
HIPK4Q8NE63 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 KRASP1-201ENST00000407852 552 ntBASIC17.57■□□□□ 0.4
HIPK4Q8NE63 AC239809.2-201ENST00000415381 517 ntBASIC17.57■□□□□ 0.4
HIPK4Q8NE63 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 AL023875.1-201ENST00000640777 796 ntBASIC17.57■□□□□ 0.4
HIPK4Q8NE63 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 AL096828.2-201ENST00000567259 1965 ntBASIC17.57■□□□□ 0.4
HIPK4Q8NE63 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIPK4Q8NE63 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 AC233263.1-201ENST00000578059 224 ntBASIC17.56■□□□□ 0.4
HIPK4Q8NE63 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIPK4Q8NE63 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 KRT8P45-201ENST00000414328 1447 ntBASIC17.55■□□□□ 0.4
HIPK4Q8NE63 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 AL445675.2-201ENST00000620291 557 ntBASIC17.55■□□□□ 0.4
HIPK4Q8NE63 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIPK4Q8NE63 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms