Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 AL390955.1-201ENST00000428694 934 ntBASIC18.76■□□□□ 0.59
CCDC89Q8N998 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 FITM1-202ENST00000559294 800 ntBASIC18.76■□□□□ 0.59
CCDC89Q8N998 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 AC112497.1-201ENST00000624824 639 ntBASIC18.76■□□□□ 0.59
CCDC89Q8N998 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC89Q8N998 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC89Q8N998 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 MIR1238-201ENST00000408483 83 ntBASIC18.75■□□□□ 0.59
CCDC89Q8N998 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 C2orf69P3-201ENST00000565542 1120 ntBASIC18.75■□□□□ 0.59
CCDC89Q8N998 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 PRORSD1P-202ENST00000563365 2154 ntBASIC18.75■□□□□ 0.59
CCDC89Q8N998 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC89Q8N998 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC89Q8N998 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC89Q8N998 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC89Q8N998 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC89Q8N998 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC89Q8N998 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC89Q8N998 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC89Q8N998 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms