Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 AC099336.1-202ENST00000602961 463 ntBASIC16.77■□□□□ 0.28
BEST3Q8N1M1 AL121772.3-201ENST00000610840 674 ntBASIC16.77■□□□□ 0.28
BEST3Q8N1M1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST3Q8N1M1 AC005332.8-201ENST00000622750 2735 ntBASIC16.77■□□□□ 0.28
BEST3Q8N1M1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST3Q8N1M1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
BEST3Q8N1M1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
BEST3Q8N1M1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST3Q8N1M1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST3Q8N1M1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST3Q8N1M1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST3Q8N1M1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 ANO7L1-203ENST00000602586 1720 ntBASIC16.76■□□□□ 0.27
BEST3Q8N1M1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AL024508.2-201ENST00000607749 1894 ntBASIC16.76■□□□□ 0.27
BEST3Q8N1M1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AC004870.1-201ENST00000315132 882 ntBASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AL845331.1-201ENST00000424978 1190 ntBASIC16.76■□□□□ 0.27
BEST3Q8N1M1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AC091304.2-201ENST00000564639 760 ntBASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST3Q8N1M1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 AC091607.1-201ENST00000490318 1060 ntBASIC16.75■□□□□ 0.27
BEST3Q8N1M1 AC113404.2-201ENST00000507884 177 ntBASIC16.75■□□□□ 0.27
BEST3Q8N1M1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 AC011840.4-201ENST00000578471 627 ntBASIC16.75■□□□□ 0.27
BEST3Q8N1M1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST3Q8N1M1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 KRT18P31-201ENST00000506277 1292 ntBASIC16.74■□□□□ 0.27
BEST3Q8N1M1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST3Q8N1M1 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms