Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC008667.4-201ENST00000607370 168 ntBASIC21.88■■□□□ 1.09
SLX4Q8IY92 AC106028.4-201ENST00000614509 607 ntBASIC21.88■■□□□ 1.09
SLX4Q8IY92 AC073592.5-201ENST00000624854 528 ntBASIC21.88■■□□□ 1.09
SLX4Q8IY92 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLX4Q8IY92 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.88■■□□□ 1.09
SLX4Q8IY92 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
SLX4Q8IY92 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.88■■□□□ 1.09
SLX4Q8IY92 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLX4Q8IY92 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLX4Q8IY92 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLX4Q8IY92 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
SLX4Q8IY92 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 AL353593.2-201ENST00000602529 1483 ntBASIC21.87■■□□□ 1.09
SLX4Q8IY92 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 AC010654.1-201ENST00000615722 808 ntBASIC21.87■■□□□ 1.09
SLX4Q8IY92 AC010507.1-201ENST00000633895 436 ntBASIC21.87■■□□□ 1.09
SLX4Q8IY92 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 ESPNP-201ENST00000270691 2015 ntBASIC21.87■■□□□ 1.09
SLX4Q8IY92 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLX4Q8IY92 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SLX4Q8IY92 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.86■■□□□ 1.09
SLX4Q8IY92 ANO7L1-203ENST00000602586 1720 ntBASIC21.86■■□□□ 1.09
SLX4Q8IY92 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 AP000344.2-201ENST00000512987 629 ntBASIC21.86■■□□□ 1.09
SLX4Q8IY92 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.86■■□□□ 1.09
SLX4Q8IY92 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.86■■□□□ 1.09
SLX4Q8IY92 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.86■■□□□ 1.09
SLX4Q8IY92 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLX4Q8IY92 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 AL139400.1-201ENST00000366220 510 ntBASIC21.85■■□□□ 1.09
SLX4Q8IY92 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLX4Q8IY92 RPS15P9-201ENST00000494093 319 ntBASIC21.85■■□□□ 1.09
SLX4Q8IY92 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 PDPK2P-202ENST00000562415 1191 ntBASIC21.85■■□□□ 1.09
SLX4Q8IY92 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLX4Q8IY92 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLX4Q8IY92 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLX4Q8IY92 MIR770-201ENST00000390219 98 ntBASIC21.85■■□□□ 1.09
SLX4Q8IY92 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLX4Q8IY92 AC093028.1-201ENST00000622998 982 ntBASIC21.85■■□□□ 1.09
SLX4Q8IY92 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLX4Q8IY92 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.85■■□□□ 1.09
SLX4Q8IY92 SIRPAP1-201ENST00000448467 1770 ntBASIC21.84■■□□□ 1.09
SLX4Q8IY92 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.84■■□□□ 1.09
SLX4Q8IY92 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.84■■□□□ 1.09
SLX4Q8IY92 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.84■■□□□ 1.09
SLX4Q8IY92 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.84■■□□□ 1.09
SLX4Q8IY92 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.84■■□□□ 1.09
SLX4Q8IY92 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.84■■□□□ 1.09
SLX4Q8IY92 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SLX4Q8IY92 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLX4Q8IY92 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms