Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 AL024508.2-201ENST00000607749 1894 ntBASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 AP000867.3-201ENST00000524675 377 ntBASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 AC124864.1-201ENST00000623408 392 ntBASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 AC126763.1-201ENST00000552015 2118 ntBASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM48Q8IWZ4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 TOB2P1-201ENST00000469761 992 ntBASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 MIR3180-1-201ENST00000580374 94 ntBASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 MIR3180-3-201ENST00000584616 94 ntBASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AL592071.1-201ENST00000611956 408 ntBASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM48Q8IWZ4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM48Q8IWZ4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TRIM48Q8IWZ4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 CROCCP3-202ENST00000420820 1947 ntBASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM48Q8IWZ4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms