Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 CCDC74BP1-201ENST00000508880 1123 ntBASIC25.51■■□□□ 1.67
UBR1Q8IWV7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 AC004877.2-201ENST00000623941 599 ntBASIC25.51■■□□□ 1.67
UBR1Q8IWV7 AL513210.1-201ENST00000629608 234 ntBASIC25.51■■□□□ 1.67
UBR1Q8IWV7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBR1Q8IWV7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 AC103564.2-201ENST00000432853 1299 ntBASIC25.5■■□□□ 1.67
UBR1Q8IWV7 HLA-J-203ENST00000494367 1087 ntBASIC25.5■■□□□ 1.67
UBR1Q8IWV7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 AC092902.6-201ENST00000641783 218 ntBASIC25.5■■□□□ 1.67
UBR1Q8IWV7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
UBR1Q8IWV7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 AC093010.1-201ENST00000473625 1624 ntBASIC25.49■■□□□ 1.67
UBR1Q8IWV7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 AC109322.1-201ENST00000524499 1264 ntBASIC25.49■■□□□ 1.67
UBR1Q8IWV7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 BID-204ENST00000399767 2129 ntTSL 2 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC25.49■■□□□ 1.67
UBR1Q8IWV7 FUT8-AS1-201ENST00000621019 1521 ntBASIC25.48■■□□□ 1.67
UBR1Q8IWV7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 AC068137.2-201ENST00000605408 478 ntBASIC25.48■■□□□ 1.67
UBR1Q8IWV7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC25.48■■□□□ 1.67
UBR1Q8IWV7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 AC023141.5-201ENST00000458585 616 ntBASIC25.47■■□□□ 1.67
UBR1Q8IWV7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 OR7E47P-204ENST00000575924 449 ntBASIC25.47■■□□□ 1.67
UBR1Q8IWV7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 SIRPAP1-201ENST00000448467 1770 ntBASIC25.47■■□□□ 1.67
UBR1Q8IWV7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
UBR1Q8IWV7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 AC004461.1-201ENST00000412461 403 ntBASIC25.46■■□□□ 1.67
UBR1Q8IWV7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 AC022145.2-201ENST00000598203 171 ntBASIC25.46■■□□□ 1.67
UBR1Q8IWV7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
UBR1Q8IWV7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms