Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 TSPY12P-201ENST00000421279 868 ntBASIC17.3■□□□□ 0.36
RNF44Q7L0R7 DRAXINP1-201ENST00000437611 948 ntBASIC17.3■□□□□ 0.36
RNF44Q7L0R7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 MIR3180-1-201ENST00000580374 94 ntBASIC17.3■□□□□ 0.36
RNF44Q7L0R7 MIR3180-3-201ENST00000584616 94 ntBASIC17.3■□□□□ 0.36
RNF44Q7L0R7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF44Q7L0R7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 AC009113.1-201ENST00000570267 2443 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 KRT18P1-202ENST00000452408 1331 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 KRT18P65-201ENST00000439811 1286 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 TPSP2-201ENST00000561760 610 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 AC092119.3-201ENST00000612618 583 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 IGHV3-41-201ENST00000613121 348 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 AC009154.2-201ENST00000621177 724 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 AC132938.6-201ENST00000623828 1655 ntBASIC17.29■□□□□ 0.36
RNF44Q7L0R7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF44Q7L0R7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.28■□□□□ 0.36
RNF44Q7L0R7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF44Q7L0R7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms