Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.46□□□□□ -0.57
LINC00575Q6W349 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 AC034268.1-201ENST00000441047 882 ntBASIC11.46□□□□□ -0.57
LINC00575Q6W349 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00575Q6W349 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
LINC00575Q6W349 AC133552.2-202ENST00000575694 574 ntBASIC11.46□□□□□ -0.57
LINC00575Q6W349 AC120498.8-201ENST00000614275 531 ntBASIC11.46□□□□□ -0.57
LINC00575Q6W349 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
LINC00575Q6W349 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.58
LINC00575Q6W349 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
LINC00575Q6W349 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00575Q6W349 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AC105020.1-201ENST00000435356 2205 ntBASIC11.45□□□□□ -0.58
LINC00575Q6W349 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AL162727.3-201ENST00000635661 2787 ntBASIC11.45□□□□□ -0.58
LINC00575Q6W349 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 OR2A1-AS1-201ENST00000462305 773 ntBASIC11.45□□□□□ -0.58
LINC00575Q6W349 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 C1QL1P1-201ENST00000568105 661 ntBASIC11.45□□□□□ -0.58
LINC00575Q6W349 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 MAZ-216ENST00000616501 991 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AC008894.3-201ENST00000624324 3103 ntBASIC11.45□□□□□ -0.58
LINC00575Q6W349 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC00575Q6W349 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 AC093010.1-201ENST00000473625 1624 ntBASIC11.45□□□□□ -0.58
LINC00575Q6W349 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00575Q6W349 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms