Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PACS1Q6VY07 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.27■□□□□ 0.52
PACS1Q6VY07 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PACS1Q6VY07 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PACS1Q6VY07 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PACS1Q6VY07 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PACS1Q6VY07 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PACS1Q6VY07 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PACS1Q6VY07 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PACS1Q6VY07 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PACS1Q6VY07 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PACS1Q6VY07 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.27■□□□□ 0.51
PACS1Q6VY07 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PACS1Q6VY07 LINC01126-201ENST00000623515 1646 ntBASIC18.27■□□□□ 0.51
PACS1Q6VY07 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.27■□□□□ 0.51
PACS1Q6VY07 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 AC006116.8-202ENST00000587620 1550 ntBASIC18.26■□□□□ 0.51
PACS1Q6VY07 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 AC005521.1-201ENST00000393351 872 ntBASIC18.26■□□□□ 0.51
PACS1Q6VY07 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 AC010240.3-201ENST00000607688 395 ntBASIC18.26■□□□□ 0.51
PACS1Q6VY07 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PACS1Q6VY07 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PACS1Q6VY07 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 AC024243.1-201ENST00000609234 778 ntBASIC18.25■□□□□ 0.51
PACS1Q6VY07 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PACS1Q6VY07 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PACS1Q6VY07 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PACS1Q6VY07 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PACS1Q6VY07 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms