Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ZNF549Q6P9A3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 KRT18P55-202ENST00000578578 1546 ntBASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 SPDYE15P-201ENST00000424157 909 ntBASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 AC006116.8-202ENST00000587620 1550 ntBASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 GNAS-203ENST00000306120 1878 ntBASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF549Q6P9A3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 HTR7P1-202ENST00000624664 4411 ntBASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 AC117947.1-201ENST00000427448 529 ntBASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 BX664615.1-201ENST00000443558 458 ntBASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 YBX1P2-201ENST00000489612 999 ntBASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 AC034232.1-201ENST00000506026 1064 ntBASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 DUTP2-201ENST00000519164 463 ntBASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 AL391807.1-203ENST00000604392 2365 ntBASIC17.93■□□□□ 0.46
ZNF549Q6P9A3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 KRT18P57-201ENST00000443599 1254 ntBASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 AL031432.5-201ENST00000641059 760 ntBASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ZNF549Q6P9A3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms