Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LYSMD4Q5XG99 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 KRT18P27-201ENST00000427733 1299 ntBASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AC136632.2-201ENST00000512891 861 ntBASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 PMPCAP1-201ENST00000508114 1576 ntBASIC17.66■□□□□ 0.42
LYSMD4Q5XG99 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 AC073592.4-201ENST00000623827 446 ntBASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms