Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 AL671277.2-201ENST00000458060 996 ntBASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 AP003733.1-201ENST00000491725 852 ntBASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CTSL3PQ5NE16 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 KRT18P65-201ENST00000439811 1286 ntBASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTSL3PQ5NE16 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 RNF126P1-202ENST00000569893 925 ntBASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.78■□□□□ 0.44
CTSL3PQ5NE16 AC026471.1-201ENST00000564629 3026 ntBASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 FAM210CP-201ENST00000445714 574 ntBASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
CTSL3PQ5NE16 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms