Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 FAM87A-204ENST00000613235 858 ntBASIC17.59■□□□□ 0.41
SGO1Q5FBB7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.59■□□□□ 0.41
SGO1Q5FBB7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SGO1Q5FBB7 LINC01568-207ENST00000641790 1380 ntBASIC17.58■□□□□ 0.4
SGO1Q5FBB7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 AC009065.1-201ENST00000564055 1225 ntBASIC17.58■□□□□ 0.4
SGO1Q5FBB7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SGO1Q5FBB7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 AC066615.1-201ENST00000640911 628 ntBASIC17.57■□□□□ 0.4
SGO1Q5FBB7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SGO1Q5FBB7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 AL024508.2-201ENST00000607749 1894 ntBASIC17.56■□□□□ 0.4
SGO1Q5FBB7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.56■□□□□ 0.4
SGO1Q5FBB7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms