Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AC006116.8-202ENST00000587620 1550 ntBASIC19.27■□□□□ 0.67
CDR2Q01850 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDR2Q01850 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.27■□□□□ 0.67
CDR2Q01850 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDR2Q01850 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.26■□□□□ 0.67
CDR2Q01850 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.26■□□□□ 0.67
CDR2Q01850 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.26■□□□□ 0.67
CDR2Q01850 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CDR2Q01850 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDR2Q01850 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.26■□□□□ 0.67
CDR2Q01850 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDR2Q01850 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDR2Q01850 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.26■□□□□ 0.67
CDR2Q01850 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.26■□□□□ 0.67
CDR2Q01850 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.26■□□□□ 0.67
CDR2Q01850 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 AC113404.2-201ENST00000507884 177 ntBASIC19.26■□□□□ 0.67
CDR2Q01850 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.26■□□□□ 0.67
CDR2Q01850 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CDR2Q01850 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.26■□□□□ 0.67
CDR2Q01850 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDR2Q01850 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.25■□□□□ 0.67
CDR2Q01850 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDR2Q01850 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 AL391807.1-203ENST00000604392 2365 ntBASIC19.25■□□□□ 0.67
CDR2Q01850 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CDR2Q01850 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDR2Q01850 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDR2Q01850 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.25■□□□□ 0.67
CDR2Q01850 AC005521.1-201ENST00000393351 872 ntBASIC19.25■□□□□ 0.67
CDR2Q01850 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 AC211429.1-201ENST00000415277 523 ntBASIC19.25■□□□□ 0.67
CDR2Q01850 SPDYE15P-201ENST00000424157 909 ntBASIC19.25■□□□□ 0.67
CDR2Q01850 YBX1P2-201ENST00000489612 999 ntBASIC19.25■□□□□ 0.67
CDR2Q01850 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.25■□□□□ 0.67
CDR2Q01850 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDR2Q01850 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.25■□□□□ 0.67
CDR2Q01850 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDR2Q01850 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDR2Q01850 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CDR2Q01850 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDR2Q01850 AC012317.2-201ENST00000623305 2251 ntBASIC19.25■□□□□ 0.67
CDR2Q01850 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
CDR2Q01850 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.24■□□□□ 0.67
CDR2Q01850 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDR2Q01850 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDR2Q01850 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.24■□□□□ 0.67
CDR2Q01850 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 KRT89P-201ENST00000620027 1478 ntBASIC19.24■□□□□ 0.67
CDR2Q01850 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDR2Q01850 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
CDR2Q01850 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CDR2Q01850 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms