Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.91■□□□□ 0.62
CBX1P83916 AC092384.3-202ENST00000564646 2873 ntBASIC18.91■□□□□ 0.62
CBX1P83916 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.9■□□□□ 0.62
CBX1P83916 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.9■□□□□ 0.62
CBX1P83916 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.9■□□□□ 0.62
CBX1P83916 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.9■□□□□ 0.62
CBX1P83916 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 AC092068.3-201ENST00000587894 2016 ntBASIC18.9■□□□□ 0.62
CBX1P83916 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.9■□□□□ 0.62
CBX1P83916 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 AC099063.4-201ENST00000641099 1602 ntBASIC18.9■□□□□ 0.62
CBX1P83916 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CBX1P83916 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 IGHV3-19-201ENST00000521488 291 ntBASIC18.9■□□□□ 0.62
CBX1P83916 AC138907.5-202ENST00000569484 235 ntBASIC18.9■□□□□ 0.62
CBX1P83916 MIR4466-201ENST00000606121 54 ntBASIC18.9■□□□□ 0.62
CBX1P83916 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.9■□□□□ 0.62
CBX1P83916 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.9■□□□□ 0.62
CBX1P83916 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CBX1P83916 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.9■□□□□ 0.62
CBX1P83916 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.9■□□□□ 0.62
CBX1P83916 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.9■□□□□ 0.62
CBX1P83916 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CBX1P83916 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CBX1P83916 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CBX1P83916 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CBX1P83916 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CBX1P83916 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX1P83916 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 AC097381.1-201ENST00000429019 1296 ntBASIC18.89■□□□□ 0.61
CBX1P83916 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX1P83916 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.89■□□□□ 0.61
CBX1P83916 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX1P83916 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 AC126544.1-201ENST00000580842 1059 ntBASIC18.89■□□□□ 0.61
CBX1P83916 AC105233.4-201ENST00000642045 216 ntBASIC18.89■□□□□ 0.61
CBX1P83916 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX1P83916 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CBX1P83916 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX1P83916 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CBX1P83916 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX1P83916 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CBX1P83916 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX1P83916 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.88■□□□□ 0.61
CBX1P83916 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX1P83916 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.88■□□□□ 0.61
CBX1P83916 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX1P83916 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX1P83916 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.88■□□□□ 0.61
CBX1P83916 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CBX1P83916 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX1P83916 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
CBX1P83916 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX1P83916 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CBX1P83916 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX1P83916 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CBX1P83916 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX1P83916 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms