Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.32■□□□□ 0.2
RPS4XP62701 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.32■□□□□ 0.2
RPS4XP62701 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RPS4XP62701 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.32■□□□□ 0.2
RPS4XP62701 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS4XP62701 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RPS4XP62701 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RPS4XP62701 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.32■□□□□ 0.2
RPS4XP62701 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS4XP62701 AC008687.5-201ENST00000593746 558 ntBASIC16.32■□□□□ 0.2
RPS4XP62701 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS4XP62701 AL023973.1-201ENST00000624619 620 ntBASIC16.32■□□□□ 0.2
RPS4XP62701 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.32■□□□□ 0.2
RPS4XP62701 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RPS4XP62701 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS4XP62701 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 AC012317.2-201ENST00000623305 2251 ntBASIC16.31■□□□□ 0.2
RPS4XP62701 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RPS4XP62701 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.31■□□□□ 0.2
RPS4XP62701 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RPS4XP62701 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 AL671277.2-201ENST00000458060 996 ntBASIC16.31■□□□□ 0.2
RPS4XP62701 AL359075.1-203ENST00000462729 1002 ntBASIC16.31■□□□□ 0.2
RPS4XP62701 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.31■□□□□ 0.2
RPS4XP62701 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RPS4XP62701 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RPS4XP62701 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.31■□□□□ 0.2
RPS4XP62701 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RPS4XP62701 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RPS4XP62701 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RPS4XP62701 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS4XP62701 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RPS4XP62701 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RPS4XP62701 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPS4XP62701 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS4XP62701 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS4XP62701 PVRIG2P-201ENST00000435460 978 ntBASIC16.3■□□□□ 0.2
RPS4XP62701 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.3■□□□□ 0.2
RPS4XP62701 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.3■□□□□ 0.2
RPS4XP62701 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.3■□□□□ 0.2
RPS4XP62701 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS4XP62701 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.3■□□□□ 0.2
RPS4XP62701 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.3■□□□□ 0.2
RPS4XP62701 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS4XP62701 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS4XP62701 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms