Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN17P56750 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN17P56750 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CLDN17P56750 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CLDN17P56750 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CLDN17P56750 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN17P56750 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.14■□□□□ 0.17
CLDN17P56750 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN17P56750 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN17P56750 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN17P56750 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN17P56750 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN17P56750 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.14■□□□□ 0.17
CLDN17P56750 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN17P56750 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CLDN17P56750 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN17P56750 AC138028.4-201ENST00000564984 1845 ntBASIC16.14■□□□□ 0.17
CLDN17P56750 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN17P56750 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN17P56750 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN17P56750 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN17P56750 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 AP003733.1-201ENST00000491725 852 ntBASIC16.13■□□□□ 0.17
CLDN17P56750 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CLDN17P56750 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 NTF6B-201ENST00000591913 560 ntBASIC16.13■□□□□ 0.17
CLDN17P56750 AC083849.1-201ENST00000615227 514 ntBASIC16.13■□□□□ 0.17
CLDN17P56750 KRT89P-201ENST00000620027 1478 ntBASIC16.13■□□□□ 0.17
CLDN17P56750 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 LINC00602-201ENST00000629776 2065 ntBASIC16.13■□□□□ 0.17
CLDN17P56750 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLDN17P56750 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN17P56750 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN17P56750 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLDN17P56750 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLDN17P56750 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN17P56750 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN17P56750 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CLDN17P56750 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN17P56750 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLDN17P56750 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 MIR662-201ENST00000384847 95 ntBASIC16.12■□□□□ 0.17
CLDN17P56750 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN17P56750 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN17P56750 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN17P56750 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.12■□□□□ 0.17
CLDN17P56750 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms