Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.72■□□□□ 0.27
PER3P56645 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.72■□□□□ 0.27
PER3P56645 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.72■□□□□ 0.27
PER3P56645 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.72■□□□□ 0.27
PER3P56645 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.72■□□□□ 0.27
PER3P56645 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.72■□□□□ 0.27
PER3P56645 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PER3P56645 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PER3P56645 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PER3P56645 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PER3P56645 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.72■□□□□ 0.27
PER3P56645 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.71■□□□□ 0.27
PER3P56645 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PER3P56645 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.71■□□□□ 0.27
PER3P56645 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.71■□□□□ 0.27
PER3P56645 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PER3P56645 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.71■□□□□ 0.27
PER3P56645 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.71■□□□□ 0.27
PER3P56645 KRT18P31-201ENST00000506277 1292 ntBASIC16.71■□□□□ 0.27
PER3P56645 FOSL1P1-201ENST00000511041 816 ntBASIC16.71■□□□□ 0.27
PER3P56645 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.71■□□□□ 0.27
PER3P56645 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PER3P56645 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.71■□□□□ 0.27
PER3P56645 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.71■□□□□ 0.27
PER3P56645 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PER3P56645 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PER3P56645 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.71■□□□□ 0.26
PER3P56645 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PER3P56645 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.7■□□□□ 0.26
PER3P56645 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PER3P56645 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PER3P56645 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.7■□□□□ 0.26
PER3P56645 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
PER3P56645 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.7■□□□□ 0.26
PER3P56645 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
PER3P56645 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PER3P56645 HLA-F-220ENST00000434407 884 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms