Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC25A1P53007 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SLC25A1P53007 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC25A1P53007 AC133963.1-201ENST00000504166 1679 ntBASIC16.06■□□□□ 0.16
SLC25A1P53007 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC25A1P53007 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC25A1P53007 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC25A1P53007 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC25A1P53007 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC25A1P53007 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC25A1P53007 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC25A1P53007 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC25A1P53007 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC25A1P53007 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC25A1P53007 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC25A1P53007 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC25A1P53007 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 AC139713.2-201ENST00000641328 2723 ntBASIC16.05■□□□□ 0.16
SLC25A1P53007 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 CYP2D8P-201ENST00000433633 1490 ntBASIC16.05■□□□□ 0.16
SLC25A1P53007 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 PRORSD1P-202ENST00000563365 2154 ntBASIC16.05■□□□□ 0.16
SLC25A1P53007 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 PVRIG2P-201ENST00000435460 978 ntBASIC16.05■□□□□ 0.16
SLC25A1P53007 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC25A1P53007 NAPSB-206ENST00000562112 1266 ntBASIC16.05■□□□□ 0.16
SLC25A1P53007 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC25A1P53007 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
SLC25A1P53007 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLC25A1P53007 AC010947.1-201ENST00000623454 693 ntBASIC16.05■□□□□ 0.16
SLC25A1P53007 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC25A1P53007 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC25A1P53007 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 AL138688.1-201ENST00000624851 1594 ntBASIC16.04■□□□□ 0.16
SLC25A1P53007 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC25A1P53007 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 AC100803.2-201ENST00000562459 1963 ntBASIC16.04■□□□□ 0.16
SLC25A1P53007 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC25A1P53007 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 HMGA1P5-201ENST00000412453 271 ntBASIC16.04■□□□□ 0.16
SLC25A1P53007 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC25A1P53007 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC25A1P53007 FAM87A-204ENST00000613235 858 ntBASIC16.04■□□□□ 0.16
SLC25A1P53007 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms