Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
LBX1P52954 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBX1P52954 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LBX1P52954 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LBX1P52954 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.26■□□□□ 0.83
LBX1P52954 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.26■□□□□ 0.83
LBX1P52954 SPDYE11-202ENST00000450699 704 ntBASIC20.26■□□□□ 0.83
LBX1P52954 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.26■□□□□ 0.83
LBX1P52954 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.26■□□□□ 0.83
LBX1P52954 SPDYE9P-201ENST00000570642 692 ntBASIC20.26■□□□□ 0.83
LBX1P52954 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.26■□□□□ 0.83
LBX1P52954 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 SPDYE10P-202ENST00000612005 668 ntBASIC20.26■□□□□ 0.83
LBX1P52954 SPDYE8P-202ENST00000612377 668 ntBASIC20.26■□□□□ 0.83
LBX1P52954 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.26■□□□□ 0.83
LBX1P52954 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LBX1P52954 AL512408.1-201ENST00000569378 2000 ntBASIC20.26■□□□□ 0.83
LBX1P52954 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.26■□□□□ 0.83
LBX1P52954 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LBX1P52954 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LBX1P52954 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LBX1P52954 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.25■□□□□ 0.83
LBX1P52954 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LBX1P52954 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.25■□□□□ 0.83
LBX1P52954 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.25■□□□□ 0.83
LBX1P52954 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LBX1P52954 AL158211.3-201ENST00000607385 239 ntBASIC20.25■□□□□ 0.83
LBX1P52954 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.25■□□□□ 0.83
LBX1P52954 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LBX1P52954 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LBX1P52954 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LBX1P52954 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LBX1P52954 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
LBX1P52954 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.24■□□□□ 0.83
LBX1P52954 AL671277.1-201ENST00000429656 993 ntBASIC20.24■□□□□ 0.83
LBX1P52954 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.24■□□□□ 0.83
LBX1P52954 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.24■□□□□ 0.83
LBX1P52954 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 AC122714.2-201ENST00000502787 707 ntBASIC20.24■□□□□ 0.83
LBX1P52954 AC097493.3-201ENST00000509725 367 ntBASIC20.24■□□□□ 0.83
LBX1P52954 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.24■□□□□ 0.83
LBX1P52954 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.24■□□□□ 0.83
LBX1P52954 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.24■□□□□ 0.83
LBX1P52954 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LBX1P52954 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.24■□□□□ 0.83
LBX1P52954 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.24■□□□□ 0.83
LBX1P52954 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 GGTLC5P-201ENST00000617623 998 ntBASIC20.24■□□□□ 0.83
LBX1P52954 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LBX1P52954 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LBX1P52954 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.24■□□□□ 0.83
LBX1P52954 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.24■□□□□ 0.83
LBX1P52954 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.24■□□□□ 0.83
LBX1P52954 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
LBX1P52954 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LBX1P52954 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.23■□□□□ 0.83
LBX1P52954 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.23■□□□□ 0.83
LBX1P52954 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LBX1P52954 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LBX1P52954 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LBX1P52954 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LBX1P52954 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LBX1P52954 PTCHD3P3-201ENST00000403073 906 ntBASIC20.23■□□□□ 0.83
LBX1P52954 GPS2P2-201ENST00000430745 888 ntBASIC20.23■□□□□ 0.83
LBX1P52954 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.23■□□□□ 0.83
LBX1P52954 CXCL1P1-201ENST00000502804 216 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms