Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
EFNA3P52797 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 MTCL1P1-201ENST00000446207 792 ntBASIC16.89■□□□□ 0.29
EFNA3P52797 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.89■□□□□ 0.29
EFNA3P52797 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.89■□□□□ 0.29
EFNA3P52797 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.89■□□□□ 0.29
EFNA3P52797 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 Z69720.1-201ENST00000601483 472 ntBASIC16.89■□□□□ 0.29
EFNA3P52797 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.89■□□□□ 0.29
EFNA3P52797 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.89■□□□□ 0.29
EFNA3P52797 AL096828.2-201ENST00000567259 1965 ntBASIC16.89■□□□□ 0.29
EFNA3P52797 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
EFNA3P52797 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.89■□□□□ 0.29
EFNA3P52797 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EFNA3P52797 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
EFNA3P52797 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.88■□□□□ 0.29
EFNA3P52797 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.88■□□□□ 0.29
EFNA3P52797 KRT18P65-201ENST00000439811 1286 ntBASIC16.88■□□□□ 0.29
EFNA3P52797 AC011840.4-201ENST00000578471 627 ntBASIC16.88■□□□□ 0.29
EFNA3P52797 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.88■□□□□ 0.29
EFNA3P52797 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.88■□□□□ 0.29
EFNA3P52797 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.88■□□□□ 0.29
EFNA3P52797 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EFNA3P52797 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EFNA3P52797 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.88■□□□□ 0.29
EFNA3P52797 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
EFNA3P52797 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EFNA3P52797 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.87■□□□□ 0.29
EFNA3P52797 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 AC090164.3-201ENST00000610780 2143 ntBASIC16.87■□□□□ 0.29
EFNA3P52797 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.87■□□□□ 0.29
EFNA3P52797 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.87■□□□□ 0.29
EFNA3P52797 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.87■□□□□ 0.29
EFNA3P52797 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.87■□□□□ 0.29
EFNA3P52797 KRT18P31-201ENST00000506277 1292 ntBASIC16.87■□□□□ 0.29
EFNA3P52797 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.87■□□□□ 0.29
EFNA3P52797 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.87■□□□□ 0.29
EFNA3P52797 IFNL4P1-201ENST00000607083 540 ntBASIC16.87■□□□□ 0.29
EFNA3P52797 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
EFNA3P52797 AL691432.3-201ENST00000621860 400 ntBASIC16.87■□□□□ 0.29
EFNA3P52797 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.87■□□□□ 0.29
EFNA3P52797 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
EFNA3P52797 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EFNA3P52797 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.87■□□□□ 0.29
EFNA3P52797 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EFNA3P52797 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
EFNA3P52797 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
EFNA3P52797 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
EFNA3P52797 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EFNA3P52797 AC120498.9-201ENST00000339021 3867 ntBASIC16.86■□□□□ 0.29
EFNA3P52797 AL020996.1-203ENST00000536896 2307 ntBASIC16.86■□□□□ 0.29
EFNA3P52797 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EFNA3P52797 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EFNA3P52797 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EFNA3P52797 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms