Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.29■□□□□ 0.36
HLCSP50747 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 MIR3180-5-201ENST00000583743 153 ntBASIC17.29■□□□□ 0.36
HLCSP50747 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.29■□□□□ 0.36
HLCSP50747 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLCSP50747 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLCSP50747 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.28■□□□□ 0.36
HLCSP50747 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
HLCSP50747 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLCSP50747 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.28■□□□□ 0.36
HLCSP50747 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
HLCSP50747 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HLCSP50747 AL031133.1-201ENST00000406807 723 ntBASIC17.28■□□□□ 0.36
HLCSP50747 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.28■□□□□ 0.36
HLCSP50747 GCSHP2-201ENST00000560971 527 ntBASIC17.28■□□□□ 0.36
HLCSP50747 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.28■□□□□ 0.36
HLCSP50747 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HLCSP50747 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.28■□□□□ 0.36
HLCSP50747 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.28■□□□□ 0.36
HLCSP50747 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HLCSP50747 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.28■□□□□ 0.36
HLCSP50747 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.28■□□□□ 0.36
HLCSP50747 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.28■□□□□ 0.36
HLCSP50747 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.28■□□□□ 0.36
HLCSP50747 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLCSP50747 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLCSP50747 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HLCSP50747 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.27■□□□□ 0.36
HLCSP50747 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.27■□□□□ 0.36
HLCSP50747 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
HLCSP50747 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.27■□□□□ 0.36
HLCSP50747 AL359075.1-203ENST00000462729 1002 ntBASIC17.27■□□□□ 0.36
HLCSP50747 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.27■□□□□ 0.36
HLCSP50747 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.27■□□□□ 0.36
HLCSP50747 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms