Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.32■□□□□ 0.52
GRIA1P42261 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.32■□□□□ 0.52
GRIA1P42261 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.32■□□□□ 0.52
GRIA1P42261 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.32■□□□□ 0.52
GRIA1P42261 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.32■□□□□ 0.52
GRIA1P42261 AC079602.3-201ENST00000623931 403 ntBASIC18.32■□□□□ 0.52
GRIA1P42261 AC133561.5-201ENST00000635547 218 ntBASIC18.32■□□□□ 0.52
GRIA1P42261 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.32■□□□□ 0.52
GRIA1P42261 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GRIA1P42261 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.32■□□□□ 0.52
GRIA1P42261 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GRIA1P42261 LINC00602-201ENST00000629776 2065 ntBASIC18.32■□□□□ 0.52
GRIA1P42261 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GRIA1P42261 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
GRIA1P42261 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
GRIA1P42261 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
GRIA1P42261 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.31■□□□□ 0.52
GRIA1P42261 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIA1P42261 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GRIA1P42261 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.31■□□□□ 0.52
GRIA1P42261 DUTP2-201ENST00000519164 463 ntBASIC18.31■□□□□ 0.52
GRIA1P42261 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.31■□□□□ 0.52
GRIA1P42261 AL441883.1-201ENST00000566170 1045 ntBASIC18.31■□□□□ 0.52
GRIA1P42261 AC012306.2-201ENST00000609350 630 ntBASIC18.31■□□□□ 0.52
GRIA1P42261 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIA1P42261 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.31■□□□□ 0.52
GRIA1P42261 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
GRIA1P42261 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.31■□□□□ 0.52
GRIA1P42261 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.31■□□□□ 0.52
GRIA1P42261 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.31■□□□□ 0.52
GRIA1P42261 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GRIA1P42261 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
GRIA1P42261 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GRIA1P42261 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GRIA1P42261 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.3■□□□□ 0.52
GRIA1P42261 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.3■□□□□ 0.52
GRIA1P42261 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GRIA1P42261 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.3■□□□□ 0.52
GRIA1P42261 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
GRIA1P42261 AC106820.2-201ENST00000563775 3264 ntBASIC18.3■□□□□ 0.52
GRIA1P42261 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.3■□□□□ 0.52
GRIA1P42261 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GRIA1P42261 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GRIA1P42261 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.29■□□□□ 0.52
GRIA1P42261 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
GRIA1P42261 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GRIA1P42261 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.29■□□□□ 0.52
GRIA1P42261 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GRIA1P42261 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GRIA1P42261 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GRIA1P42261 AP000523.1-201ENST00000398242 1049 ntBASIC18.29■□□□□ 0.52
GRIA1P42261 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
GRIA1P42261 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GRIA1P42261 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.29■□□□□ 0.52
GRIA1P42261 AC139713.2-201ENST00000641328 2723 ntBASIC18.29■□□□□ 0.52
GRIA1P42261 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.29■□□□□ 0.52
GRIA1P42261 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.29■□□□□ 0.52
GRIA1P42261 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.29■□□□□ 0.52
GRIA1P42261 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA1P42261 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms