Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFSF9P41273 AC246785.2-201ENST00000432512 513 ntBASIC19.52■□□□□ 0.72
TNFSF9P41273 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.52■□□□□ 0.72
TNFSF9P41273 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.52■□□□□ 0.72
TNFSF9P41273 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.52■□□□□ 0.72
TNFSF9P41273 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.52■□□□□ 0.72
TNFSF9P41273 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TNFSF9P41273 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TNFSF9P41273 ABALON-201ENST00000629058 1903 ntBASIC19.52■□□□□ 0.72
TNFSF9P41273 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFSF9P41273 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.52■□□□□ 0.72
TNFSF9P41273 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.52■□□□□ 0.72
TNFSF9P41273 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF9P41273 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF9P41273 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF9P41273 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.52■□□□□ 0.71
TNFSF9P41273 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF9P41273 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF9P41273 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TNFSF9P41273 AC100803.2-201ENST00000562459 1963 ntBASIC19.52■□□□□ 0.71
TNFSF9P41273 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.52■□□□□ 0.71
TNFSF9P41273 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TNFSF9P41273 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TNFSF9P41273 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TNFSF9P41273 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFSF9P41273 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFSF9P41273 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TNFSF9P41273 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TNFSF9P41273 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFSF9P41273 FOSL1P1-201ENST00000511041 816 ntBASIC19.51■□□□□ 0.71
TNFSF9P41273 DUTP2-201ENST00000519164 463 ntBASIC19.51■□□□□ 0.71
TNFSF9P41273 PRELID1P1-202ENST00000567272 903 ntBASIC19.51■□□□□ 0.71
TNFSF9P41273 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFSF9P41273 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.51■□□□□ 0.71
TNFSF9P41273 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFSF9P41273 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TNFSF9P41273 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFSF9P41273 AC020763.4-201ENST00000623414 4170 ntBASIC19.51■□□□□ 0.71
TNFSF9P41273 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFSF9P41273 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.51■□□□□ 0.71
TNFSF9P41273 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TNFSF9P41273 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.51■□□□□ 0.71
TNFSF9P41273 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TNFSF9P41273 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.5■□□□□ 0.71
TNFSF9P41273 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFSF9P41273 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TNFSF9P41273 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 KRT8P47-201ENST00000604727 1398 ntBASIC19.5■□□□□ 0.71
TNFSF9P41273 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TNFSF9P41273 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TNFSF9P41273 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.5■□□□□ 0.71
TNFSF9P41273 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.5■□□□□ 0.71
TNFSF9P41273 VENTXP7-201ENST00000475503 772 ntBASIC19.5■□□□□ 0.71
TNFSF9P41273 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.5■□□□□ 0.71
TNFSF9P41273 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.5■□□□□ 0.71
TNFSF9P41273 AC099336.1-202ENST00000602961 463 ntBASIC19.5■□□□□ 0.71
TNFSF9P41273 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.5■□□□□ 0.71
TNFSF9P41273 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TNFSF9P41273 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.5■□□□□ 0.71
TNFSF9P41273 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TNFSF9P41273 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF9P41273 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.49■□□□□ 0.71
TNFSF9P41273 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TNFSF9P41273 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.49■□□□□ 0.71
TNFSF9P41273 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TNFSF9P41273 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TNFSF9P41273 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms