Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 KRT18P55-202ENST00000578578 1546 ntBASIC17.98■□□□□ 0.47
HMGCLP35914 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.98■□□□□ 0.47
HMGCLP35914 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
HMGCLP35914 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 RN7SL606P-201ENST00000472779 293 ntBASIC17.98■□□□□ 0.47
HMGCLP35914 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.98■□□□□ 0.47
HMGCLP35914 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGCLP35914 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HMGCLP35914 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLP35914 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCLP35914 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLP35914 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.97■□□□□ 0.47
HMGCLP35914 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLP35914 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGCLP35914 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 AC016734.2-201ENST00000624325 1377 ntBASIC17.97■□□□□ 0.47
HMGCLP35914 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
HMGCLP35914 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGCLP35914 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGCLP35914 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HMGCLP35914 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HMGCLP35914 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLP35914 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HMGCLP35914 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGCLP35914 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLP35914 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLP35914 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGCLP35914 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLP35914 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLP35914 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLP35914 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.96■□□□□ 0.47
HMGCLP35914 CHCHD2P8-201ENST00000429873 447 ntBASIC17.96■□□□□ 0.47
HMGCLP35914 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLP35914 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLP35914 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLP35914 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGCLP35914 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLP35914 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HMGCLP35914 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLP35914 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLP35914 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLP35914 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HMGCLP35914 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.96■□□□□ 0.46
HMGCLP35914 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HMGCLP35914 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLP35914 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLP35914 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms